Dirk Fey Picture
Dr. Dirk Fey
Dipl.-Ing. Technische Kybernetik

Publications

[4] Dirk Fey, Sean Commins and Eric Bullinger. Feedback control strategies for spatial navigation revealed by dynamic modelling of learning in the Morris Water maze. Journal of Computational Neuroscience , 2010 (in print). (link PubMed).
[3] Dirk Fey, Rolf Findeisen and Eric Bullinger. Identification of biochemical reaction networks using a parameter-free coordinate system. In Control Theory and Systems Biology , Pablo A. Iglesias and Brian Ingalls (editors) , MIT press, 297--316, 2009. (Link publisher, Link chapter)
[2] Holger Conzelmann, Dirk Fey and Ernst D. Gilles. Exact model reduction of combinatorial reaction networks. BMC Systems Biology 2:78, 2008. (Link)
[1] Eric Bullinger, Dirk Fey, Marcello Farina and Rolf Findeisen. Identifikation Biochemischer Reaktionsnetzwerke: Ein beobachterbasierter Ansatz AT-Automatisierungstechnik 56(5):269--279, 2008. (Link )
[4] Dirk Fey and Eric Bullinger. Limiting the parameter search space for dynamic models with rational kinetics using semi-definite programming. In 11th Symposium on Computer Applications in Biotechnology (CAB), Leuven, , 2010. (Link)
[3] Dirk Fey and Eric Bullinger. A dissipative approach to the identification of kinetic reaction networks. In IFAC Symposium on Systems Identification (SYSID), Saint Malo, 1259-1264, 2009. (Link)
[2] Dirk Fey, Rolf Findeisen and Eric Bullinger. Parameter estimation in kinetic reaction models using nonlinear observers is facilitated by model extensions. In International Federation of Automatic Control World Congress (IFAC WC), Seoul, 313-318, 2008. (Link)
[1]Rajanikanth Vadigepalli, Dirk Fey, and James S. Schwaber. Modeling neuronal adaptation in the brain: Integrating receptor signaling and electrophysiology. In Foundations of Systems Biology in Engineering (FOSBE), Stuttgart, 2007. (Link)
[2]Dirk Fey, Rajanikanth Vadigepalli, Thomas Sauter, and James Schwaber. Integration and anlalysis of Ang II induced neuronal plasticity by means of multi-scale modeling. Master's thesis, Thomas Jefferson University (TJU) & University Stuttgart, Daniel Baugh Institute for functional genomics and computaional biology, Department of Pathology, Anatomy and Cell Biology, TJU Philadelphia, PA 19107, October 2006. (Link)
[1]Dirk Fey, Holger Conzelman, and Ernst D. Gilles. Systematic model reductoin of signal transduction pathways using observability analysis revelas system-inherent structures. Studienarbeit University Stuttgart, Institute for System Dynamics, University of Stuttgart, October 2006. (Link)
[5]Dirk Fey and Eric Bullinger. Parameter estimation for biochemical reaction networks. In University of Strathclyde Research Presentation Day, Glasgow, 2008. (Poster)
[4]Dirk Fey and Eric Bullinger. Parameter estimation in regulatory networks of biochemical reactions. In International Conference on Systems Biology (ICSB), Long Beach, 2007. (Abstract)
[3]Dirk Fey and Eric Bullinger. Parameter Identification in Reaction Kinetic Networks with Products of Generalized Mass Action and Hill Terms In Foundations of Systems Biology in Engineering (FOSBE), Stuttgart, 2007. (Poster)
[2]Dirk Fey, Rajanikanth Vadigepalli, Thomas Sauter, and James S. Schwaber. Integration of signal transduction and firing behavior in neurons by means of multiscale modeling. In FEBS Advanced Lecture Course on Systems Biology: From Molecules to Life, Gosau, 2007. (Poster)
[1]Dirk Fey, Rajanikanth Vadigepalli, Thomas Sauter, and James S. Schwaber. Integration of signal transduction and firing behavior in neurons by means of multiscale modeling. In Hamilton Institute International Workshop on Systems Biology, Maynooth, 2006.
[1]Rajanikanth Vadigepalli, Dirk Fey, and James S. Schwaber. Integrated modeling of Angiotensin II induced neuronal plasticity in the brain. In AIChE Annual Meeting, 2006. (Link)