logging to file "example.txt" is on >> load CAMP.ped read in: 8 markers from 651 pedigrees (652 nuclear families,2011 persons) >> load CAMPZ.phe 12 quantitative traits have been successfully read 2011 persons have been phenotyped >> trait affection** zposfevp zposfvcp zlogpc20 zampfmea zpmpfmea zbdabs zfevbd zbdpred zsxcmean ztoteos zlogige zncorpos >> trait zposfevp affection zposfevp** zposfvcp zlogpc20 zampfmea zpmpfmea zbdabs zfevbd zbdpred zsxcmean ztoteos zlogige zncorpos >> fbat trait zposfevp; offset 0.000; model additive; test bi-allelic; minsize 10; p 1.000 Marker Allele afreq fam# S E(S) Var(S) Z P m709 1 0.998 4 ***** m709 2 0.002 4 ***** m654 1 0.628 405 -5.843 22.274 125.936 -2.506 0.012226 m654 2 0.372 405 27.017 -1.101 125.936 2.506 0.012226 m47 1 0.363 399 -8.639 10.381 131.913 -1.656 0.097717 m47 2 0.637 399 15.943 -3.077 131.913 1.656 0.097717 p46 1 0.409 419 20.809 -7.469 134.153 2.441 0.014628 p46 2 0.591 419 -14.243 14.035 134.153 -2.441 0.014628 p79 1 0.631 391 19.099 1.185 137.074 1.530 0.125997 p79 2 0.369 391 -5.897 12.017 137.074 -1.530 0.125997 p252 1 0.227 283 -12.981 2.179 96.650 -1.542 0.123062 p252 2 0.773 283 26.699 11.539 96.650 1.542 0.123062 p491 1 0.989 26 -1.424 -1.929 9.703 0.162 0.871210 p491 2 0.011 26 -1.310 -0.805 9.703 -0.162 0.871210 p523 1 0.795 314 35.403 19.016 103.382 1.612 0.107022 p523 2 0.205 314 -14.011 2.377 103.382 -1.612 0.107022 Total number of test(s): 14 >> displayp 0.05 current p_value is 0.050000 >> displayp 0.05 current p_value is 0.050000 >> fbat trait zposfevp; offset 0.000; model additive; test bi-allelic; minsize 10; p 0.050 Marker Allele afreq fam# S E(S) Var(S) Z P m654 1 0.628 405 -5.843 22.274 125.936 -2.506 0.012226 m654 2 0.372 405 27.017 -1.101 125.936 2.506 0.012226 p46 1 0.409 419 20.809 -7.469 134.153 2.441 0.014628 p46 2 0.591 419 -14.243 14.035 134.153 -2.441 0.014628 Total number of test(s): 14 >> model r current genetic model is recessive >> fbat trait zposfevp; offset 0.000; model recessive; test bi-allelic; minsize 10; p 0.050 Marker Allele afreq fam# S E(S) Var(S) Z P m654 1 0.628 324 -8.717 8.490 75.543 -1.980 0.047727 p46 2 0.591 326 -13.499 6.197 76.047 -2.259 0.023911 Total number of test(s): 13 >> model d current genetic model is dominant >> fbat trait zposfevp; offset 0.000; model dominant; test bi-allelic; minsize 10; p 0.050 Marker Allele afreq fam# S E(S) Var(S) Z P m654 2 0.372 324 30.403 13.195 75.543 1.980 0.047727 p46 1 0.409 326 26.843 7.147 76.047 2.259 0.023911 Total number of test(s): 13 >> mode m current test mode is multi-allelic >> fbat trait zposfevp; offset 0.000; model dominant; test multi-allelic; minsize 10; p 0.050 Marker Allele# DF CHISQ P m709 *** less than 2 major alleles *** m654 2 2 6.307 0.042712 p46 2 2 6.189 0.045289 p491 *** less than 2 major alleles *** Total number of test(s): 2 >> mode b current test mode is bi-allelic >> model a current genetic model is additive >> fbat -o trait zposfevp; offset 0.000; model additive; test bi-allelic; minsize 10; p 0.050 Marker Allele afreq fam# S E(S) Var(S) Z P Offset m654 1 0.628 404 -21.982 6.232 125.799 -2.515 0.011888 0.031707 m654 2 0.372 404 15.638 -12.576 125.799 2.515 0.011888 0.031707 p46 1 0.409 420 17.284 -10.936 134.142 2.437 0.014830 0.008835 p46 2 0.591 420 -18.685 9.535 134.142 -2.437 0.014830 0.008835 Total number of test(s): 14 >> fbat -e trait zposfevp; offset 0.000; model additive; test bi-allelic; minsize 10; p 0.050 Marker Allele afreq fam# S E(S) Var(S) Z P m654 1 0.628 355 -5.625 22.492 130.341 -2.463 0.013784 m654 2 0.372 355 27.235 -0.883 130.341 2.463 0.013784 p46 1 0.409 361 18.917 -9.360 127.658 2.503 0.012325 p46 2 0.591 361 -16.133 12.144 127.658 -2.503 0.012325 Total number of test(s): 14 >> log off