3 | Best: rs3805006 (7) | Gene | 4.78-4.78Mb | MAF | HWE(case) | HWE(cont) | p-value | imp. | rank |
rs1962325 | ITPR1 | 4775550 | 0.3034 | 0.75 | 0.218 | 0.529 | 0.0033 | 43 | |
rs3805006 | ITPR1 | 4775769 | 0.3783 | 7.498e-175 | 0.04268 | 7.163e-96 | 0.052 | 1 | |
rs3792498 | ITPR1 | 4776967 | 0.2352 | 1 | 0.7972 | 0.9223 | 0.00086 | 123 | |
rs7627280 | ITPR1 | 4777165 | 0.3084 | 0.8324 | 0.194 | 0.9644 | 0.0034 | 41 | |
rs3792499 | ITPR1 | 4779081 | 0.3091 | 0.4226 | 0.2465 | 0.2942 | 0.00049 | 174 | |
rs11712379 | ITPR1 | 4782310 | 0.3692 | 0.247 | 0.2483 | 0.3808 | 0.00047 | 180 | |
rs3805012 | ITPR1 | 4782550 | 0.267 | 0.4528 | 0.3465 | 0.9258 | 0.00068 | 141 | |
6 | Best: rs2524067 (2) | Gene | 31.35-31.35Mb | MAF | HWE(case) | HWE(cont) | p-value | imp. | rank |
rs3132486 | 31351149 | 0.3986 | 0.2891 | 0.2958 | 4.151e-47 | 0.00038 | 195 | ||
rs2524067 | 31353800 | 0.2181 | 0.5394 | 0.5653 | 1.015e-35 | 0.00042 | 188 | ||
6 | Best: rs2853986 (6) | Gene | 31.45-31.46Mb | MAF | HWE(case) | HWE(cont) | p-value | imp. | rank |
rs2853986 | 31446823 | 0.1699 | 0.03424 | 0.4474 | 2.973e-41 | 0.00083 | 130 | ||
rs2844559 | 31448054 | 0.1868 | 0.5455 | 0.2195 | 4.489e-41 | 0.00055 | 160 | ||
rs2523638 | 31452252 | 0.3983 | 0.105 | 0.7944 | 3.056e-43 | 0.0004 | 193 | ||
rs2442749 | 31460019 | 0.3476 | 0.5422 | 0.9643 | 2.261e-37 | 0.00038 | 194 | ||
rs9266774 | 31460859 | 0.1298 | 0.1232 | 0.599 | 3.21e-31 | 0.00072 | 138 | ||
rs9266775 | 31461396 | 0.1296 | 0.123 | 0.5987 | 4.372e-31 | 0.00069 | 140 | ||
6 | Best: rs9273363 (164) | Gene | 31.55-33.06Mb | MAF | HWE(case) | HWE(cont) | p-value | imp. | rank |
rs2248459 | 31554689 | 0.4014 | 0.005865 | 0.6784 | 9.297e-61 | 0.0011 | 103 | ||
rs2248462 | 31554775 | 0.1884 | 0.02137 | 0.2007 | 2.579e-27 | 0.00049 | 175 | ||
rs2248617 | 31556512 | 0.4026 | 0.01665 | 1 | 3.346e-60 | 0.0011 | 101 | ||
rs3099844 | 31556955 | 0.1861 | 0.06411 | 0.7609 | 1.424e-43 | 0.001 | 108 | ||
rs2516422 | 31557248 | 0.1884 | 0.02142 | 0.1829 | 3.273e-27 | 0.00055 | 165 | ||
rs2395034 | 31568122 | 0.1909 | 0.01804 | 0.3152 | 3.661e-27 | 0.00053 | 169 | ||
rs9348876 | 31683255 | 0.05545 | 0.4297 | 1 | 2.734e-19 | 0.00066 | 145 | ||
rs2736177 | 31694073 | 0.1031 | 0.7988 | 0.2214 | 8.227e-55 | 0.002 | 65 | ||
rs1046089 | PRRC2A | 31710946 | 0.4393 | 0.9273 | 1 | 2.426e-74 | 0.0027 | 50 | |
rs760293 | BAG6 | 31719756 | 0.1343 | 1 | 0.5205 | 8.852e-48 | 0.0014 | 85 | |
rs3130048 | BAG6 | 31721718 | 0.3217 | 0.03716 | 0.3299 | 1.486e-34 | 0.00086 | 124 | |
rs805301 | BAG6 | 31726100 | 0.4539 | 0.8541 | 0.4561 | 5.17e-73 | 0.0029 | 47 | |
rs2142234 | LY6G5B | 31747108 | 0.07762 | 0.0006377 | 0.006103 | 6.373e-12 | 0.00041 | 190 | |
rs9378164 | 31751501 | 0.04717 | 0.6456 | 0.07279 | 4.6e-16 | 0.00049 | 176 | ||
rs376510 | LY6G6C | 31796179 | 0.07681 | 1 | 0.6153 | 2.706e-16 | 0.00079 | 134 | |
rs805294 | LY6G6C | 31796196 | 0.4199 | 0.001384 | 0.01778 | 1.684e-61 | 0.0021 | 57 | |
rs707915 | MSH5MSH5-SAPCD1 | 31818947 | 0.07651 | 0.9039 | 1 | 3.031e-17 | 0.00086 | 125 | |
rs3130484 | MSH5MSH5-SAPCD1 | 31823861 | 0.1745 | 0.06824 | 1 | 1.294e-52 | 0.002 | 64 | |
rs3131379 | MSH5MSH5-SAPCD1 | 31829012 | 0.1742 | 0.03251 | 0.8672 | 6.298e-51 | 0.002 | 61 | |
rs3115672 | MSH5MSH5-SAPCD1 | 31835876 | 0.1601 | 0.04487 | 0.3725 | 3.626e-42 | 0.00081 | 132 | |
rs480092 | LSM2VARS | 31872878 | 0.1864 | 0.0597 | 0.6809 | 1.904e-15 | 0.00036 | 196 | |
rs2763979 | HSPA1B | 31902571 | 0.4184 | 0.103 | 1 | 9.093e-63 | 0.0027 | 51 | |
rs9267673 | 31991658 | 0.1022 | 0.3943 | 0.9107 | 2.138e-06 | 0.0004 | 192 | ||
rs406936 | SKIV2L | 32041140 | 0.103 | 0.1356 | 0.3641 | 1.78e-25 | 0.00055 | 158 | |
rs492899 | SKIV2L | 32041497 | 0.1027 | 0.02351 | 1 | 6.997e-22 | 0.0012 | 94 | |
rs3130287 | TNXB | 32158522 | 0.09951 | 0.726 | 0.1523 | 3.78e-79 | 0.0046 | 34 | |
rs1150753 | TNXB | 32167845 | 0.1745 | 0.02951 | 0.6128 | 5.514e-55 | 0.0023 | 56 | |
rs408359 | AGPAT1 | 32249861 | 0.07836 | 0.808 | 0.1097 | 5.384e-14 | 0.0011 | 97 | |
rs204991 | GPSM3 | 32269344 | 0.2472 | 0.000378 | 0.8251 | 1.477e-22 | 0.00045 | 185 | |
rs204990 | GPSM3 | 32269408 | 0.2467 | 0.0003793 | 0.9117 | 6.364e-23 | 0.00041 | 191 | |
rs204989 | GPSM3 | 32269830 | 0.2595 | 1.025e-06 | 0.5878 | 4.055e-24 | 0.00035 | 197 | |
rs2071278 | NOTCH4 | 32273422 | 0.2072 | 0.01799 | 0.6306 | 1.651e-44 | 0.0015 | 82 | |
rs3131294 | NOTCH4 | 32288124 | 0.09196 | 0.08409 | 0.1621 | 2.442e-97 | 0.0079 | 23 | |
rs379464 | NOTCH4 | 32294326 | 0.05862 | 1 | 0.5027 | 2.764e-14 | 0.0015 | 81 | |
SNP_A-2064274 | 32300414 | 0.06877 | 2.9e-07 | 0.004294 | 1.877e-14 | 0.0013 | 91 | ||
rs377763 | 32307122 | 0.2808 | 7.51e-05 | 0.3749 | 1.09e-78 | 0.0076 | 26 | ||
rs424232 | 32316302 | 0.3229 | 0.01199 | 0.3799 | 2.149e-33 | 0.00098 | 112 | ||
rs6936204 | 32325070 | 0.3405 | 0.001124 | 0.03364 | 2.604e-06 | 0.0011 | 104 | ||
rs1265777 | C6orf10 | 32381136 | 0.4205 | 3.06e-06 | 0.5588 | 1.008e-17 | 0.00061 | 148 | |
rs9268208 | C6orf10 | 32388569 | 0.1806 | 0.02769 | 0.1782 | 2.396e-48 | 0.0019 | 69 | |
rs9268230 | C6orf10 | 32395545 | 0.2524 | 0.07848 | 0.05199 | 2.848e-97 | 0.0037 | 37 | |
rs574710 | C6orf10 | 32396168 | 0.423 | 1.12e-05 | 0.6133 | 9.231e-18 | 0.00061 | 147 | |
rs539703 | C6orf10 | 32396440 | 0.4209 | 7.193e-06 | 0.4591 | 5.041e-18 | 0.0006 | 149 | |
rs3132959 | C6orf10 | 32406920 | 0.1647 | 0.4006 | 0.05227 | 3.991e-138 | 0.011 | 15 | |
rs926591 | C6orf10 | 32413668 | 0.421 | 3.754e-06 | 0.5591 | 1.028e-17 | 0.00055 | 162 | |
rs3129900 | C6orf10 | 32413957 | 0.1081 | 1 | 0.0778 | 1.769e-118 | 0.0092 | 21 | |
rs4959093 | C6orf10 | 32421075 | 0.4209 | 4.659e-06 | 0.5334 | 1.231e-17 | 0.0006 | 151 | |
rs910050 | C6orf10 | 32423632 | 0.4118 | 0.0007855 | 0.9686 | 1.492e-19 | 0.0011 | 96 | |
rs910049 | C6orf10 | 32423705 | 0.1681 | 0.04272 | 0.0002171 | 2.399e-137 | 0.0094 | 19 | |
rs2894249 | C6orf10 | 32433813 | 0.1615 | 0.5233 | 0.4025 | 3.298e-129 | 0.0093 | 20 | |
rs2143461 | C6orf10 | 32443325 | 0.2215 | 0.000114 | 0.1606 | 9.544e-19 | 0.00034 | 200 | |
rs3129932 | C6orf10 | 32444105 | 0.1646 | 0.4011 | 0.05852 | 1.021e-137 | 0.011 | 14 | |
rs3129933 | C6orf10 | 32444139 | 0.2188 | 0.0003976 | 0.1473 | 7.251e-19 | 0.00053 | 168 | |
rs3129934 | C6orf10 | 32444165 | 0.1084 | 1 | 0.04998 | 1.837e-119 | 0.0091 | 22 | |
rs9268402 | C6orf10 | 32449331 | 0.4888 | 0.0001156 | 0.9119 | 0.001204 | 0.00057 | 155 | |
rs9391858 | C6orf10 | 32449376 | 0.1293 | 0.8958 | 0.3523 | 6.335e-17 | 0.0013 | 90 | |
rs9268403 | C6orf10 | 32449451 | 0.3542 | 1.695e-17 | 0.4866 | 1.039e-34 | 0.0029 | 48 | |
rs12201454 | 32451664 | 0.3538 | 5.455e-17 | 0.4594 | 7.914e-35 | 0.0026 | 52 | ||
rs9268429 | 32453030 | 0.3583 | 7.664e-17 | 0.001964 | 9.296e-31 | 0.0025 | 54 | ||
rs2894254 | 32453667 | 0.1755 | 0.0001282 | 0.932 | 2.081e-60 | 0.0038 | 36 | ||
rs3129953 | HCG23 | 32469799 | 0.2147 | 0.000142 | 0.4326 | 1.68e-38 | 0.0013 | 87 | |
rs2076533 | BTNL2 | 32471505 | 0.477 | 9.852e-05 | 0.7651 | 5.575e-14 | 0.00098 | 110 | |
rs2076530 | BTNL2 | 32471794 | 0.4819 | 6.694e-05 | 0.9406 | 5.681e-13 | 0.00085 | 127 | |
rs9268480 | BTNL2 | 32471822 | 0.3542 | 2.458e-17 | 0.4598 | 1.775e-34 | 0.0025 | 53 | |
rs3806156 | BTNL2 | 32481676 | 0.4082 | 7.604e-11 | 0.8744 | 7.792e-19 | 0.00088 | 121 | |
rs3763307 | BTNL2 | 32482600 | 0.3539 | 2.335e-17 | 0.4339 | 2.938e-34 | 0.0027 | 49 | |
rs3763308 | BTNL2 | 32482618 | 0.02622 | 1 | 0.6041 | 1.256e-19 | 0.00056 | 156 | |
rs6930933 | 32491388 | 0.2207 | 8.733e-06 | 0.7051 | 4.643e-35 | 0.001 | 105 | ||
rs2001099 | 32491611 | 0.2222 | 4.032e-06 | 0.6621 | 1.107e-33 | 0.0011 | 98 | ||
rs2001097 | 32491836 | 0.2208 | 5.163e-06 | 0.7057 | 6.749e-35 | 0.0011 | 99 | ||
rs9268541 | 32492505 | 0.06689 | 1 | 0.1057 | 4.103e-09 | 0.00057 | 154 | ||
rs3135378 | 32493077 | 0.2209 | 5.178e-06 | 0.6595 | 9.46e-35 | 0.0009 | 118 | ||
rs3135377 | 32493377 | 0.148 | 0.5509 | 1 | 3.956e-155 | 0.015 | 10 | ||
rs3135376 | 32493448 | 0.221 | 5.163e-06 | 0.5712 | 9.858e-35 | 0.00086 | 126 | ||
rs2395161 | 32495730 | 0.2207 | 5.178e-06 | 0.7052 | 6.285e-35 | 0.00096 | 113 | ||
rs2395164 | 32495838 | 0.2208 | 4.704e-06 | 0.6155 | 2.339e-33 | 0.00089 | 119 | ||
rs2395167 | 32496286 | 0.2217 | 1.511e-05 | 0.413 | 2.769e-35 | 0.001 | 106 | ||
rs2213580 | 32496552 | 0.2203 | 1.054e-05 | 0.6145 | 2.352e-34 | 0.00094 | 114 | ||
rs3135366 | 32496687 | 0.2201 | 1.064e-05 | 0.6586 | 2.273e-34 | 0.00084 | 128 | ||
rs9268557 | 32497283 | 0.4605 | 1.22e-08 | 0.8534 | 1.064e-44 | 0.0039 | 35 | ||
rs9268560 | 32497490 | 0.4333 | 1.765e-07 | 0.9705 | 2.71e-34 | 0.0035 | 39 | ||
rs3129847 | 32504484 | 0.3253 | 2.165e-08 | 0.1748 | 4.231e-19 | 0.00073 | 137 | ||
rs3135342 | 32504593 | 0.3274 | 9.966e-08 | 0.3484 | 1.026e-19 | 0.001 | 107 | ||
rs7756262 | 32506653 | 0.4309 | 2.327e-17 | 0.6284 | 1.709e-55 | 0.0053 | 28 | ||
rs5000563 | 32512113 | 0.3271 | 5.77e-08 | 0.3721 | 2.287e-19 | 0.0009 | 116 | ||
rs3129872 | HLA-DRA | 32515131 | 0.327 | 5.803e-08 | 0.3723 | 1.889e-19 | 0.00098 | 111 | |
rs9268645 | HLA-DRA | 32516505 | 0.4386 | 6.341e-19 | 0.752 | 3.778e-57 | 0.0056 | 27 | |
rs3129877 | HLA-DRA | 32516575 | 0.3286 | 1.638e-08 | 0.4753 | 3.267e-20 | 0.0012 | 95 | |
rs3135393 | HLA-DRA | 32516820 | 0.227 | 0.0003467 | 0.1126 | 2.643e-32 | 0.00071 | 139 | |
rs3135392 | HLA-DRA | 32517220 | 0.3995 | 1.383e-11 | 0.3693 | 0.006895 | 0.00051 | 171 | |
rs3177928 | HLA-DRA | 32520413 | 0.1276 | 0.4314 | 0.6101 | 6.454e-15 | 0.0013 | 89 | |
rs7194 | HLA-DRA | 32520458 | 0.3721 | 3.651e-08 | 0.7004 | 3.205e-11 | 0.0014 | 84 | |
rs1051336 | HLA-DRA | 32520570 | 0.2266 | 6.738e-05 | 0.9032 | 1.046e-30 | 0.00054 | 166 | |
rs9268831 | 32535726 | 0.4688 | 3.987e-08 | 0.2091 | 1.025e-25 | 0.0019 | 67 | ||
rs9268853 | 32537621 | 0.4079 | 1.389e-32 | 0.8735 | 1.05e-25 | 0.0036 | 38 | ||
rs9268858 | 32537736 | 0.4084 | 1.145e-31 | 0.9366 | 6.955e-26 | 0.0034 | 42 | ||
rs9268861 | 32537872 | 0.2426 | 2.593e-08 | 0.5022 | 5.434e-22 | 0.00055 | 159 | ||
rs4428528 | 32538340 | 0.2547 | 0.007264 | 0.0001929 | 1.497e-19 | 0.00045 | 184 | ||
rs7766843 | 32538707 | 0.2824 | 2.573e-08 | 0.7698 | 1.326e-14 | 0.00035 | 198 | ||
rs9268877 | 32539125 | 0.3089 | 0.02497 | 0.2401 | 2.072e-80 | 0.0046 | 33 | ||
rs7749092 | 32557028 | 0.2004 | 0.3361 | 0.4137 | 3.728e-86 | 0.0078 | 24 | ||
rs9270986 | 32682038 | 0.09374 | 1 | 0.1136 | 4.955e-164 | 0.021 | 4 | ||
rs615672 | LOC100507709LOC100507714 | 32682149 | 0.371 | 1.532e-11 | 0.9668 | 2.313e-22 | 0.0015 | 80 | |
rs9271208 | 32686981 | 0.3065 | 2.33e-07 | 0.5042 | 1.331e-31 | 0.0017 | 74 | ||
rs4530903 | 32689867 | 0.1027 | 0.2391 | 0.8467 | 0.06591 | 0.00046 | 181 | ||
rs9271850 | 32703038 | 0.3565 | 4.699e-07 | 0.0001795 | 7.121e-17 | 0.0011 | 102 | ||
rs3129768 | 32703061 | 0.1196 | 0.1686 | 0.204 | 2.643e-118 | 0.012 | 13 | ||
rs9272219 | 32710247 | 0.3073 | 7.387e-13 | 0.6979 | 5.678e-42 | 0.0035 | 40 | ||
rs9272346 | HLA-DQA1 | 32712350 | 0.292 | 0.01289 | 0.8155 | 5.425e-149 | 0.013 | 12 | |
rs9272723 | HLA-DQA1 | 32717405 | 0.2585 | 1 | 0.0004643 | 9.717e-153 | 0.014 | 11 | |
rs9273363 | 32734250 | 0.467 | 0.005832 | 0.6007 | 0 | 0.045 | 2 | ||
rs9275134 | 32758590 | 0.314 | 3.483e-19 | 0.5115 | 9.101e-81 | 0.011 | 16 | ||
rs2856688 | 32762618 | 0.3135 | 4.757e-19 | 0.4792 | 1.071e-80 | 0.01 | 17 | ||
rs7775228 | 32766057 | 0.1037 | 0.2812 | 0.06839 | 1.586e-22 | 0.0012 | 93 | ||
rs9469220 | 32766288 | 0.3917 | 6.74e-06 | 0.7394 | 5.597e-112 | 0.017 | 8 | ||
rs6457617 | 32771829 | 0.4791 | 4.241e-16 | 0.631 | 7.947e-15 | 0.0029 | 45 | ||
rs6457620 | 32771977 | 0.4789 | 2.999e-16 | 0.6054 | 1.148e-14 | 0.0029 | 44 | ||
rs2647015 | 32772071 | 0.08098 | 0.4316 | 0.01072 | 3.527e-29 | 0.0015 | 79 | ||
rs2647046 | 32776314 | 0.3952 | 2.945e-09 | 0.2189 | 0.0496 | 0.002 | 60 | ||
rs2858308 | 32777978 | 0.08109 | 0.7954 | 0.01802 | 2.564e-28 | 0.0013 | 88 | ||
rs9275418 | 32778222 | 0.3429 | 1.07e-16 | 0.4041 | 1.301e-120 | 0.019 | 6 | ||
SNP_A-4226034 | 32778473 | 0.1294 | 0.1341 | 0.9367 | 0.04736 | 0.0006 | 153 | ||
rs9275523 | 32782972 | 0.3216 | 1.056e-21 | 0.565 | 2.186e-122 | 0.02 | 5 | ||
rs9275572 | 32786977 | 0.4175 | 2.948e-12 | 0.8799 | 0.09441 | 0.0017 | 75 | ||
rs3957146 | 32789508 | 0.2115 | 3.665e-12 | 0.2152 | 1.027e-198 | 0.031 | 3 | ||
rs3104404 | 32790152 | 0.09669 | 1 | 0.1033 | 3.982e-55 | 0.0049 | 31 | ||
rs6936863 | 32792007 | 0.3283 | 1.204e-08 | 0.1555 | 2.485e-83 | 0.0077 | 25 | ||
rs3916765 | 32793528 | 0.2017 | 1.632e-19 | 0.1426 | 3.631e-126 | 0.017 | 9 | ||
rs9275765 | 32797302 | 0.292 | 1.43e-17 | 0.768 | 2.396e-28 | 0.0052 | 30 | ||
rs9275772 | 32797481 | 0.292 | 9.263e-18 | 0.7312 | 6.625e-28 | 0.0048 | 32 | ||
rs9461799 | 32797507 | 0.3229 | 0.4639 | 0.8746 | 8.088e-42 | 0.0017 | 76 | ||
rs9469240 | 32797979 | 0.3292 | 0.8093 | 0.6938 | 2.695e-41 | 0.0015 | 78 | ||
rs9275793 | 32798005 | 0.2923 | 2.105e-17 | 0.6946 | 6.806e-28 | 0.0053 | 29 | ||
rs2395237 | 32798923 | 0.3136 | 0.3121 | 0.4921 | 6.588e-41 | 0.0013 | 92 | ||
rs2227127 | HLA-DQA2 | 32819760 | 0.3184 | 0.619 | 0.363 | 3.138e-44 | 0.0018 | 72 | |
rs9276429 | HLA-DQA2 | 32820082 | 0.4796 | 0.3935 | 0.8238 | 6.034e-47 | 0.0018 | 70 | |
rs9276431 | HLA-DQA2 | 32820225 | 0.4796 | 0.3932 | 0.8527 | 2.931e-47 | 0.0018 | 71 | |
rs9276432 | HLA-DQA2 | 32820362 | 0.4792 | 0.3677 | 0.8528 | 7.9e-47 | 0.002 | 63 | |
rs2239800 | HLA-DQA2 | 32821245 | 0.05117 | 0.6365 | 0.0001122 | 2.033e-22 | 0.0006 | 150 | |
rs9276440 | HLA-DQA2 | 32822761 | 0.4765 | 0.296 | 0.9409 | 6.051e-46 | 0.0019 | 68 | |
rs9276448 | 32823607 | 0.07983 | 1 | 0.1807 | 0.01805 | 0.00054 | 167 | ||
rs9276490 | MIR3135B | 32826659 | 0.475 | 0.4451 | 0.8818 | 7.82e-47 | 0.0021 | 58 | |
rs5014418 | MIR3135B | 32827359 | 0.08197 | 0.5795 | 0.5126 | 0.01958 | 0.00047 | 179 | |
rs7768538 | HLA-DQB2 | 32837799 | 0.4787 | 0.3936 | 0.8237 | 8.209e-46 | 0.0017 | 77 | |
rs7453920 | HLA-DQB2 | 32837990 | 0.4798 | 0.3683 | 0.8527 | 4.501e-46 | 0.0018 | 73 | |
rs2051549 | HLA-DQB2 | 32838064 | 0.4843 | 0.3933 | 0.88 | 2.445e-49 | 0.0021 | 59 | |
rs6902723 | HLA-DQB2 | 32839938 | 0.4132 | 0.2717 | 0.9407 | 1.606e-29 | 0.00067 | 142 | |
rs6903130 | HLA-DQB2 | 32840188 | 0.4139 | 0.2505 | 0.6826 | 6.207e-30 | 0.00084 | 129 | |
rs6919798 | HLA-DQB2 | 32840868 | 0.07828 | 0.2431 | 1 | 0.05984 | 0.00042 | 189 | |
rs9296043 | 32844081 | 0.3341 | 0.9056 | 0.9064 | 1.311e-39 | 0.0014 | 86 | ||
rs9296044 | 32844122 | 0.338 | 0.5586 | 0.4377 | 5.242e-40 | 0.0014 | 83 | ||
rs1015575 | 32846093 | 0.3203 | 3.595e-05 | 0.4759 | 1.877e-45 | 0.0025 | 55 | ||
rs2857212 | 32848389 | 0.3137 | 0.1088 | 0.8743 | 3.287e-51 | 0.0029 | 46 | ||
rs17429127 | 32859592 | 0.05004 | 1 | 0.05139 | 8.35e-22 | 0.00045 | 183 | ||
rs9276712 | 32867230 | 0.04951 | 1 | 0.2266 | 1.977e-21 | 0.00045 | 182 | ||
rs2621330 | HLA-DOB | 32889502 | 0.04932 | 0.3436 | 0.0138 | 6.366e-08 | 0.00043 | 187 | |
rs2071474 | HLA-DOB | 32890560 | 0.2274 | 0.6234 | 1 | 2.368e-34 | 0.00086 | 122 | |
rs4148873 | TAP2 | 32908390 | 0.1235 | 0.09969 | 0.05146 | 9.197e-25 | 0.00092 | 115 | |
rs241428 | TAP2 | 32912048 | 0.05297 | 0.1849 | 0.8017 | 4.054e-14 | 0.00078 | 135 | |
rs241427 | TAP2 | 32912392 | 0.2775 | 0.6543 | 0.5096 | 2.935e-63 | 0.0019 | 66 | |
rs4148882 | TAP1 | 32924936 | 0.2823 | 0.4334 | 0.5021 | 1.685e-50 | 0.0011 | 100 | |
rs241403 | LOC100294145 | 32974970 | 0.4237 | 0.9192 | 0.4602 | 2.618e-49 | 0.00056 | 157 | |
rs3101942 | LOC100294145 | 32978035 | 0.3281 | 0.698 | 0.08263 | 2.818e-72 | 0.002 | 62 | |
rs188245 | 33063954 | 0.4926 | 0.7061 | 0.7076 | 1.442e-42 | 0.00034 | 199 | ||
10 | Best: rs7078771 (10) | Gene | 84.68-84.72Mb | MAF | HWE(case) | HWE(cont) | p-value | imp. | rank |
rs7078771 | NRG3 | 84679040 | 0.07564 | 3.307e-257 | 5.455e-05 | 5.421e-15 | 0.019 | 7 | |
rs17107795 | NRG3 | 84680434 | 0.06042 | 0.5077 | 0.4432 | 0.03057 | 0.0005 | 173 | |
rs7072495 | NRG3 | 84680754 | 0.06163 | 0.661 | 0.1777 | 0.0286 | 0.00055 | 164 | |
rs11812533 | NRG3 | 84681866 | 0.05977 | 0.5075 | 0.1614 | 0.05037 | 0.00055 | 161 | |
rs11814517 | NRG3 | 84681945 | 0.06009 | 1 | 0.3632 | 0.01697 | 0.00067 | 143 | |
rs17101125 | NRG3 | 84683470 | 0.06018 | 0.3728 | 0.2792 | 0.04608 | 0.00062 | 146 | |
rs10509462 | NRG3 | 84688185 | 0.06043 | 0.5111 | 0.4424 | 0.03782 | 0.0006 | 152 | |
rs11815363 | NRG3 | 84712638 | 0.06051 | 0.8263 | 0.02172 | 0.03779 | 0.00055 | 163 | |
rs11816685 | NRG3 | 84712859 | 0.06106 | 0.6611 | 0.2233 | 0.04745 | 0.00047 | 178 | |
rs11819041 | NRG3 | 84724809 | 0.06087 | 0.5113 | 0.224 | 0.02778 | 0.00052 | 170 | |
13 | Best: rs4254200 (5) | Gene | 82.21-82.33Mb | MAF | HWE(case) | HWE(cont) | p-value | imp. | rank |
rs4254200 | 82213653 | 0.4683 | 3.583e-132 | 0.5954 | 6.2e-29 | 0.0098 | 18 | ||
rs7332105 | 82242107 | 0.4238 | 0.963 | 0.8212 | 0.3067 | 0.00075 | 136 | ||
rs9546233 | 82296702 | 0.4162 | 0.9627 | 0.6223 | 0.2088 | 0.0009 | 117 | ||
rs9546237 | 82312847 | 0.4169 | 0.9628 | 0.6774 | 0.2173 | 0.00089 | 120 | ||
rs2129717 | 82325708 | 0.4166 | 0.9628 | 0.7334 | 0.2021 | 0.001 | 109 |